Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
B020004C17RikJ3QP07 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Gm37179-201ENSMUST00000194862 823 ntBASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
B020004C17RikJ3QP07 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
B020004C17RikJ3QP07 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
B020004C17RikJ3QP07 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
B020004C17RikJ3QP07 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.18■■□□□ 1.3
B020004C17RikJ3QP07 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
B020004C17RikJ3QP07 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
B020004C17RikJ3QP07 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
B020004C17RikJ3QP07 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
B020004C17RikJ3QP07 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
B020004C17RikJ3QP07 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
B020004C17RikJ3QP07 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
B020004C17RikJ3QP07 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.15■■□□□ 1.3
B020004C17RikJ3QP07 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
B020004C17RikJ3QP07 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.14■■□□□ 1.3
B020004C17RikJ3QP07 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
B020004C17RikJ3QP07 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
B020004C17RikJ3QP07 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Gm10033-202ENSMUST00000211874 928 ntBASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Gm18671-201ENSMUST00000214826 683 ntBASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
B020004C17RikJ3QP07 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
B020004C17RikJ3QP07 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
B020004C17RikJ3QP07 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
B020004C17RikJ3QP07 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
B020004C17RikJ3QP07 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
B020004C17RikJ3QP07 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
B020004C17RikJ3QP07 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms