Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Gm7514-201ENSMUST00000209475 934 ntBASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc188F6WEU2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc188F6WEU2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc188F6WEU2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc188F6WEU2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc188F6WEU2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc188F6WEU2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc188F6WEU2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc188F6WEU2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc188F6WEU2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ccdc188F6WEU2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc188F6WEU2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc188F6WEU2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc188F6WEU2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc188F6WEU2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc188F6WEU2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.07■□□□□ 0.96
Ccdc188F6WEU2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc188F6WEU2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc188F6WEU2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc188F6WEU2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc188F6WEU2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc188F6WEU2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc188F6WEU2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc188F6WEU2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc188F6WEU2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.04■□□□□ 0.96
Ccdc188F6WEU2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc188F6WEU2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc188F6WEU2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc188F6WEU2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.04■□□□□ 0.96
Ccdc188F6WEU2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 Gm20049-201ENSMUST00000219950 730 ntBASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc188F6WEU2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms