Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
Dchs1E9PVD3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dchs1E9PVD3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Dchs1E9PVD3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dchs1E9PVD3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Dchs1E9PVD3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.41■□□□□ 0.54
Dchs1E9PVD3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dchs1E9PVD3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.41■□□□□ 0.54
Dchs1E9PVD3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Dchs1E9PVD3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Dchs1E9PVD3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dchs1E9PVD3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Dchs1E9PVD3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Dchs1E9PVD3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Dchs1E9PVD3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Dchs1E9PVD3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dchs1E9PVD3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Dchs1E9PVD3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.38■□□□□ 0.53
Dchs1E9PVD3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.38■□□□□ 0.53
Dchs1E9PVD3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Dchs1E9PVD3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dchs1E9PVD3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dchs1E9PVD3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Dchs1E9PVD3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dchs1E9PVD3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dchs1E9PVD3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dchs1E9PVD3 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.34■□□□□ 0.53
Dchs1E9PVD3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dchs1E9PVD3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dchs1E9PVD3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Dchs1E9PVD3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.33■□□□□ 0.53
Dchs1E9PVD3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Dchs1E9PVD3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.33■□□□□ 0.52
Dchs1E9PVD3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dchs1E9PVD3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dchs1E9PVD3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dchs1E9PVD3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms