Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3543D3Z235 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3543D3Z235 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3543D3Z235 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm3543D3Z235 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Gm3543D3Z235 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3543D3Z235 Gm9847-201ENSMUST00000052528 599 ntBASIC18.4■□□□□ 0.54
Gm3543D3Z235 Gm13241-201ENSMUST00000094493 780 ntBASIC18.4■□□□□ 0.54
Gm3543D3Z235 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm3543D3Z235 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3543D3Z235 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.38■□□□□ 0.53
Gm3543D3Z235 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Gm3543D3Z235 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3543D3Z235 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Gm12922-201ENSMUST00000120626 809 ntBASIC18.37■□□□□ 0.53
Gm3543D3Z235 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3543D3Z235 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3543D3Z235 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm3543D3Z235 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3543D3Z235 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm3543D3Z235 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3543D3Z235 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.35■□□□□ 0.53
Gm3543D3Z235 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.34■□□□□ 0.53
Gm3543D3Z235 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.34■□□□□ 0.53
Gm3543D3Z235 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3543D3Z235 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gm3543D3Z235 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3543D3Z235 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.33■□□□□ 0.53
Gm3543D3Z235 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3543D3Z235 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3543D3Z235 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Gm3543D3Z235 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3543D3Z235 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm3543D3Z235 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms