Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist1h2acC0HKE2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist1h2acC0HKE2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hist1h2acC0HKE2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hist1h2acC0HKE2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hist1h2acC0HKE2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.61■□□□□ 0.57
Hist1h2acC0HKE2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Hist1h2acC0HKE2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h2acC0HKE2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hist1h2acC0HKE2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h2acC0HKE2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h2acC0HKE2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h2acC0HKE2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h2acC0HKE2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hist1h2acC0HKE2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hist1h2acC0HKE2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hist1h2acC0HKE2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hist1h2acC0HKE2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Gm10232-201ENSMUST00000089221 720 ntBASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h2acC0HKE2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Gm10399-202ENSMUST00000202768 748 ntBASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h2acC0HKE2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2acC0HKE2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms