Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.28■□□□□ 0.36
Col6a4A2AX52 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a4A2AX52 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a4A2AX52 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.27■□□□□ 0.36
Col6a4A2AX52 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a4A2AX52 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Col6a4A2AX52 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a4A2AX52 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a4A2AX52 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a4A2AX52 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a4A2AX52 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a4A2AX52 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.26■□□□□ 0.35
Col6a4A2AX52 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a4A2AX52 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.26■□□□□ 0.35
Col6a4A2AX52 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a4A2AX52 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.25■□□□□ 0.35
Col6a4A2AX52 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Col6a4A2AX52 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Gm43530-201ENSMUST00000195920 274 ntBASIC17.24■□□□□ 0.35
Col6a4A2AX52 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a4A2AX52 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a4A2AX52 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a4A2AX52 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a4A2AX52 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a4A2AX52 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.23■□□□□ 0.35
Col6a4A2AX52 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a4A2AX52 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col6a4A2AX52 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a4A2AX52 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a4A2AX52 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col6a4A2AX52 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col6a4A2AX52 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col6a4A2AX52 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.2■□□□□ 0.34
Col6a4A2AX52 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col6a4A2AX52 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.19■□□□□ 0.34
Col6a4A2AX52 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.19■□□□□ 0.34
Col6a4A2AX52 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col6a4A2AX52 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a4A2AX52 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a4A2AX52 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms