Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IsxA1A546 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
IsxA1A546 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IsxA1A546 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.94■□□□□ 0.62
IsxA1A546 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
IsxA1A546 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
IsxA1A546 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IsxA1A546 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IsxA1A546 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.93■□□□□ 0.62
IsxA1A546 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.93■□□□□ 0.62
IsxA1A546 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IsxA1A546 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
IsxA1A546 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IsxA1A546 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
IsxA1A546 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.92■□□□□ 0.62
IsxA1A546 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IsxA1A546 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.92■□□□□ 0.62
IsxA1A546 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.91■□□□□ 0.62
IsxA1A546 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.91■□□□□ 0.62
IsxA1A546 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.91■□□□□ 0.62
IsxA1A546 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IsxA1A546 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
IsxA1A546 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IsxA1A546 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IsxA1A546 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IsxA1A546 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IsxA1A546 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IsxA1A546 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IsxA1A546 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IsxA1A546 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.89■□□□□ 0.61
IsxA1A546 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.89■□□□□ 0.61
IsxA1A546 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
IsxA1A546 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IsxA1A546 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.88■□□□□ 0.61
IsxA1A546 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IsxA1A546 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IsxA1A546 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.87■□□□□ 0.61
IsxA1A546 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IsxA1A546 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
IsxA1A546 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.86■□□□□ 0.61
IsxA1A546 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
IsxA1A546 Mir3960-201ENSMUST00000198213 73 ntBASIC18.86■□□□□ 0.61
IsxA1A546 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IsxA1A546 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
IsxA1A546 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.86■□□□□ 0.61
IsxA1A546 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.86■□□□□ 0.61
IsxA1A546 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
IsxA1A546 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms