Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav19A0A0B4J1K4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav19A0A0B4J1K4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav19A0A0B4J1K4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav19A0A0B4J1K4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav19A0A0B4J1K4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav19A0A0B4J1K4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav19A0A0B4J1K4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav19A0A0B4J1K4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav19A0A0B4J1K4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms