Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Cap2-205ENSMUST00000225824 1634 ntBASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BC053393A0A0B4J1F6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BC053393A0A0B4J1F6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BC053393A0A0B4J1F6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BC053393A0A0B4J1F6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BC053393A0A0B4J1F6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BC053393A0A0B4J1F6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BC053393A0A0B4J1F6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BC053393A0A0B4J1F6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms