Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Gm28778A0A087WSK7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28778A0A087WSK7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28778A0A087WSK7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28778A0A087WSK7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
Gm28778A0A087WSK7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28778A0A087WSK7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
Gm28778A0A087WSK7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28778A0A087WSK7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm28778A0A087WSK7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Gm12922-201ENSMUST00000120626 809 ntBASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28778A0A087WSK7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Gm43530-201ENSMUST00000195920 274 ntBASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm28778A0A087WSK7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Gm28778A0A087WSK7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms