Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28557A0A087WQQ0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gm28557A0A087WQQ0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28557A0A087WQQ0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28557A0A087WQQ0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.4■□□□□ 0.54
Gm28557A0A087WQQ0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28557A0A087WQQ0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28557A0A087WQQ0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.39■□□□□ 0.53
Gm28557A0A087WQQ0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm28557A0A087WQQ0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28557A0A087WQQ0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28557A0A087WQQ0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28557A0A087WQQ0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28557A0A087WQQ0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm28557A0A087WQQ0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28557A0A087WQQ0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28557A0A087WQQ0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm28557A0A087WQQ0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Gm28557A0A087WQQ0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28557A0A087WQQ0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms