Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.02□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Iqck-206ENSMUST00000208658 2891 ntBASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gm14523-201ENSMUST00000117260 558 ntBASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-4-dv7A0A075B6C2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms