Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Trav9d-3A0A075B695 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Gm10232-201ENSMUST00000089221 720 ntBASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-3A0A075B695 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-3A0A075B695 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-3A0A075B695 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-3A0A075B695 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav9d-3A0A075B695 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-3A0A075B695 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-3A0A075B695 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-3A0A075B695 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-3A0A075B695 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-3A0A075B695 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.46□□□□□ -0.1
Trav9d-3A0A075B695 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Gm10399-202ENSMUST00000202768 748 ntBASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-3A0A075B695 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms