Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-4A0A075B654 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Zfp131-205ENSMUST00000223812 663 ntBASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC13.72□□□□□ -0.21
Trav3-4A0A075B654 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-4A0A075B654 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-4A0A075B654 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-4A0A075B654 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-4A0A075B654 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-4A0A075B654 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-4A0A075B654 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-4A0A075B654 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-4A0A075B654 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-4A0A075B654 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Gm9397-201ENSMUST00000200125 605 ntBASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Gm7199-201ENSMUST00000118327 1485 ntBASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav3-4A0A075B654 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3-4A0A075B654 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms