Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-2-dv6-2A0A075B650 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Gm14523-201ENSMUST00000117260 558 ntBASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-2-dv6-2A0A075B650 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms