Protein–RNA interactions for Protein: A0A075B607

Trav14-3, T cell receptor alpha variable 14-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-3A0A075B607 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav14-3A0A075B607 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav14-3A0A075B607 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav14-3A0A075B607 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14-3A0A075B607 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14-3A0A075B607 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14-3A0A075B607 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trav14-3A0A075B607 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14-3A0A075B607 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14-3A0A075B607 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav14-3A0A075B607 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14-3A0A075B607 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav14-3A0A075B607 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14-3A0A075B607 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav14-3A0A075B607 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav14-3A0A075B607 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.07■□□□□ 0
Trav14-3A0A075B607 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav14-3A0A075B607 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.06■□□□□ 0
Trav14-3A0A075B607 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms