Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Gm45444-201ENSMUST00000211394 898 ntBASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-1A0A075B601 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav9-1A0A075B601 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trav9-1A0A075B601 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trav9-1A0A075B601 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Gm13238-201ENSMUST00000117655 780 ntBASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9-1A0A075B601 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9-1A0A075B601 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav9-1A0A075B601 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms