Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm24891-201ENSMUST00000104391 136 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm3329-201ENSMUST00000159873 556 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm10807-201ENSMUST00000177134 795 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm4482-201ENSMUST00000200876 742 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb2S4R1M3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm18734-201ENSMUST00000172937 808 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm27552-201ENSMUST00000183351 62 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm27844-201ENSMUST00000183613 62 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm9257-201ENSMUST00000221254 232 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gm4978-201ENSMUST00000071565 801 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb2S4R1M3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb2S4R1M3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms