Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm6331-201ENSMUST00000217890 450 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm6478-201ENSMUST00000099450 742 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-4Q9EQM3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm44814-201ENSMUST00000207018 434 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-4Q9EQM3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms