Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2aQ9DB34 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2aQ9DB34 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2aQ9DB34 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp2aQ9DB34 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm13809-201ENSMUST00000117921 597 ntBASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm11331-201ENSMUST00000119764 288 ntBASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm13263-201ENSMUST00000121271 838 ntBASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm19353-201ENSMUST00000184561 445 ntBASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.08□□□□□ -0.48
Chmp2aQ9DB34 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm11941-201ENSMUST00000119904 610 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm18753-201ENSMUST00000201000 566 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms