Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm7Q9CQQ8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gm1848-201ENSMUST00000120711 789 ntBASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gm22138-201ENSMUST00000158748 128 ntBASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gm5996-201ENSMUST00000211110 718 ntBASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm7Q9CQQ8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm23272-201ENSMUST00000104053 129 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm12419-201ENSMUST00000116649 636 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm14942-201ENSMUST00000119642 336 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm45219-201ENSMUST00000205602 465 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm7Q9CQQ8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm7Q9CQQ8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms