Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm38151-201ENSMUST00000195085 289 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm6867-201ENSMUST00000219165 425 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Ntng1-201ENSMUST00000051253 327 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm7851-201ENSMUST00000117574 323 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm11500-201ENSMUST00000118237 601 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm11941-201ENSMUST00000119904 610 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm43002-201ENSMUST00000200310 155 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm6108-201ENSMUST00000208365 367 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm7848-201ENSMUST00000210739 718 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm5369-201ENSMUST00000217499 588 ntBASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa3Q9CQ71 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm25732-201ENSMUST00000175168 60 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm29499-201ENSMUST00000189151 486 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm28329-201ENSMUST00000191208 689 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm29171-201ENSMUST00000191397 486 ntBASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms