Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm37373-201ENSMUST00000194005 2812 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm14277-201ENSMUST00000121195 360 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm24990-201ENSMUST00000157406 323 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm27341-201ENSMUST00000183570 106 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm43184-201ENSMUST00000197247 542 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm5705-201ENSMUST00000066241 711 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim33Q99PP7 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.62□□□□□ -0.55
Trim33Q99PP7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm14028-201ENSMUST00000117434 479 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm15004-201ENSMUST00000119192 630 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm8343-201ENSMUST00000182705 994 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm18038-201ENSMUST00000197900 485 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm19287-201ENSMUST00000203190 358 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm270-201ENSMUST00000223010 976 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms