Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Mir8091-201ENSMUST00000183602 139 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm16477-201ENSMUST00000085365 801 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm17415-201ENSMUST00000096427 789 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm7781-201ENSMUST00000117258 788 ntBASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm13777-201ENSMUST00000118208 345 ntBASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh23Q99PF4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm29651-201ENSMUST00000189088 697 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm18164-201ENSMUST00000213769 927 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm18166-201ENSMUST00000215557 927 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh23Q99PF4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms