Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm11439-201ENSMUST00000118598 409 ntBASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm8913-201ENSMUST00000209491 641 ntBASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cstf3Q99LI7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm4310-201ENSMUST00000177847 889 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Mir8093-201ENSMUST00000185043 137 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm9797-202ENSMUST00000218003 294 ntBASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cstf3Q99LI7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Gm11509-201ENSMUST00000117358 325 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Mir7677-201ENSMUST00000184226 67 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Gm18038-201ENSMUST00000197900 485 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms