Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm7399-201ENSMUST00000032395 858 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm9823-201ENSMUST00000051212 327 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.67□□□□□ -0.54
Cdk9Q99J95 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdk9Q99J95 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm14441-201ENSMUST00000121960 540 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm28882-201ENSMUST00000185504 314 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm42627-201ENSMUST00000197347 224 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm43133-201ENSMUST00000197472 463 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.66□□□□□ -0.54
Cdk9Q99J95 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdk9Q99J95 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.65□□□□□ -0.54
Cdk9Q99J95 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Gm11700-201ENSMUST00000119409 403 ntBASIC11.65□□□□□ -0.54
Cdk9Q99J95 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Gm24548-201ENSMUST00000158650 108 ntBASIC11.65□□□□□ -0.54
Cdk9Q99J95 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.65□□□□□ -0.54
Cdk9Q99J95 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms