Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm15004-201ENSMUST00000119192 630 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm4986-201ENSMUST00000119731 549 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm27731-201ENSMUST00000185192 107 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm4607-201ENSMUST00000206649 577 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Thumpd1Q99J36 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm11531-201ENSMUST00000117614 555 ntBASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm37008-201ENSMUST00000195712 319 ntBASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Thumpd1Q99J36 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Thumpd1Q99J36 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms