Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gm4310-201ENSMUST00000177847 889 ntBASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Ntng1-201ENSMUST00000051253 327 ntBASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm8199-201ENSMUST00000121323 823 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Mir6979-201ENSMUST00000183927 56 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm5733-201ENSMUST00000190232 939 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm45575-201ENSMUST00000210283 548 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm1821-202ENSMUST00000227415 750 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdha3Q91Y16 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Gm13461-201ENSMUST00000120980 662 ntBASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 B9d1os-201ENSMUST00000137010 674 ntBASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Mir3102-201ENSMUST00000175555 104 ntBASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Gm5714-201ENSMUST00000197343 566 ntBASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.12□□□□□ -0.47
Pcdha3Q91Y16 Gm6450-201ENSMUST00000200896 574 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms