Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Mir706-201ENSMUST00000102262 84 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm13033-201ENSMUST00000117591 1057 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm8731-201ENSMUST00000118088 412 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm13611-201ENSMUST00000118269 318 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm11700-201ENSMUST00000119409 403 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm11783-201ENSMUST00000119549 885 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Mir8093-201ENSMUST00000185043 137 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm19175-201ENSMUST00000199895 916 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm45113-201ENSMUST00000207518 165 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp3Q91W36 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.12□□□□□ -0.47
Usp3Q91W36 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp3Q91W36 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm14193-201ENSMUST00000105067 153 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm13408-201ENSMUST00000119822 798 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm13935-201ENSMUST00000121859 798 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.11□□□□□ -0.47
Usp3Q91W36 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm9211-201ENSMUST00000182882 975 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm8641-201ENSMUST00000186995 826 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.11□□□□□ -0.47
Usp3Q91W36 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm5982-201ENSMUST00000196234 512 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm42997-202ENSMUST00000200321 985 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm17611-202ENSMUST00000220613 814 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp3Q91W36 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.11□□□□□ -0.47
Usp3Q91W36 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms