Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gm15573-201ENSMUST00000119487 540 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gm11667-201ENSMUST00000119828 486 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gm13263-201ENSMUST00000121271 838 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gm4310-201ENSMUST00000177847 889 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx41Q91VN6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx41Q91VN6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm12029-201ENSMUST00000120073 832 ntBASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm22144-201ENSMUST00000157402 102 ntBASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms