Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm43184-201ENSMUST00000197247 542 ntBASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm17827-201ENSMUST00000211825 742 ntBASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm7399-201ENSMUST00000032395 858 ntBASIC11.96□□□□□ -0.49
Trim60Q8VI40 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim60Q8VI40 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.96□□□□□ -0.5
Trim60Q8VI40 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim60Q8VI40 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm43179-201ENSMUST00000198797 275 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Olfr582-201ENSMUST00000098212 960 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.95□□□□□ -0.5
Trim60Q8VI40 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim60Q8VI40 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim60Q8VI40 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.94□□□□□ -0.5
Trim60Q8VI40 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim60Q8VI40 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms