Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cgref1Q8R1U2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cgref1Q8R1U2 Gm38169-201ENSMUST00000191822 2539 ntBASIC11.8□□□□□ -0.52
Cgref1Q8R1U2 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm6745-201ENSMUST00000199216 526 ntBASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cgref1Q8R1U2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Gm29649-201ENSMUST00000185649 419 ntBASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cgref1Q8R1U2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cgref1Q8R1U2 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cgref1Q8R1U2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms