Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc5Q8CG46 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Gm44369-201ENSMUST00000204543 2175 ntBASIC14.27□□□□□ -0.12
Smc5Q8CG46 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Gm38271-201ENSMUST00000192296 1603 ntBASIC14.27□□□□□ -0.12
Smc5Q8CG46 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.27□□□□□ -0.12
Smc5Q8CG46 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smc5Q8CG46 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm24255-201ENSMUST00000104481 128 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm15207-201ENSMUST00000119259 442 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smc5Q8CG46 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 AY036118-201ENSMUST00000200021 923 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm13097-201ENSMUST00000210722 397 ntBASIC14.27□□□□□ -0.13
Smc5Q8CG46 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc5Q8CG46 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm22323-201ENSMUST00000103832 109 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm11783-201ENSMUST00000119549 885 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm18539-201ENSMUST00000204745 1090 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm6867-201ENSMUST00000219165 425 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.26□□□□□ -0.13
Smc5Q8CG46 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smc5Q8CG46 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smc5Q8CG46 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Smc5Q8CG46 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc5Q8CG46 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Smc5Q8CG46 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smc5Q8CG46 Gm10110-202ENSMUST00000228705 3220 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms