Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc38Q8CDN8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm270-201ENSMUST00000223010 976 ntBASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc38Q8CDN8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Gm13350-201ENSMUST00000120519 479 ntBASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Gm7584-201ENSMUST00000175829 940 ntBASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 AC154352.1-201ENSMUST00000221477 2365 ntBASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc38Q8CDN8 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Gm11500-201ENSMUST00000118237 601 ntBASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.9□□□□□ -0.34
Ccdc38Q8CDN8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms