Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm23270-201ENSMUST00000104055 131 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm25214-201ENSMUST00000104573 129 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm13875-201ENSMUST00000120162 282 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm25043-201ENSMUST00000158604 212 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm18056-201ENSMUST00000207670 568 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm18061-201ENSMUST00000208350 562 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm18063-201ENSMUST00000208529 568 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Gm18052-201ENSMUST00000208750 559 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Mir433-201ENSMUST00000093564 124 ntBASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lrif1Q8CDD9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm38317-201ENSMUST00000195564 343 ntBASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.45□□□□□ -0.58
Lrif1Q8CDD9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lrif1Q8CDD9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms