Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Alx1Q8C8B0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm15131-201ENSMUST00000119124 595 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm19459-201ENSMUST00000176240 835 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm23694-201ENSMUST00000179335 110 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm5468-202ENSMUST00000227851 682 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Alx1Q8C8B0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm8111-201ENSMUST00000117659 987 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm22846-201ENSMUST00000157706 270 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm37284-201ENSMUST00000193607 539 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Alx1Q8C8B0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Alx1Q8C8B0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Alx1Q8C8B0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms