Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm7848-201ENSMUST00000210739 718 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Ntng1-201ENSMUST00000051253 327 ntBASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Trim9Q8C7M3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim9Q8C7M3 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.72□□□□□ -0.37
Trim9Q8C7M3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms