Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm7851-201ENSMUST00000117574 323 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm11450-201ENSMUST00000121144 333 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm44008-201ENSMUST00000204345 412 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm18056-201ENSMUST00000207670 568 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm18061-201ENSMUST00000208350 562 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm18063-201ENSMUST00000208529 568 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm18052-201ENSMUST00000208750 559 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm5369-201ENSMUST00000217499 588 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm14058-201ENSMUST00000116082 735 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm6108-201ENSMUST00000208365 367 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trub1Q8C0D0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.92□□□□□ -0.5
Trub1Q8C0D0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms