Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm13422-201ENSMUST00000118834 504 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm15744-201ENSMUST00000161734 213 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Mir6407-201ENSMUST00000184510 101 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm19009-201ENSMUST00000223072 823 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm9244-201ENSMUST00000056767 2129 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm37284-201ENSMUST00000193607 539 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm19046-201ENSMUST00000221263 1298 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm23680-201ENSMUST00000083162 164 ntBASIC16.26■□□□□ 0.19
Usp47Q8BY87 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Adgrv1-214ENSMUST00000224088 1492 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm13182-201ENSMUST00000122241 312 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm5100-201ENSMUST00000195631 589 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm44323-201ENSMUST00000198689 129 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm5599-201ENSMUST00000209602 788 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Gm39288-201ENSMUST00000210554 446 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 AC102368.1-201ENSMUST00000227161 892 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 AC136376.2-201ENSMUST00000228819 490 ntBASIC16.25■□□□□ 0.19
Usp47Q8BY87 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp47Q8BY87 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 AC130823.1-201ENSMUST00000228929 1549 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Gm13135-201ENSMUST00000117628 3121 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Gm24398-201ENSMUST00000157870 109 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms