Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubr7Q8BU04 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubr7Q8BU04 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm25148-201ENSMUST00000104611 123 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm28388-201ENSMUST00000186262 437 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm44008-201ENSMUST00000204345 412 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Paupar-201ENSMUST00000194826 3482 ntBASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubr7Q8BU04 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm11451-201ENSMUST00000118946 630 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm1848-201ENSMUST00000120711 789 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm3329-201ENSMUST00000159873 556 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm43966-201ENSMUST00000203301 612 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.69□□□□□ -0.54
Ubr7Q8BU04 Gm10752-201ENSMUST00000218348 729 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms