Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm23769-201ENSMUST00000104441 121 ntBASIC16.2■□□□□ 0.18
Usp54Q8BL06 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Gm43547-201ENSMUST00000197729 328 ntBASIC16.2■□□□□ 0.18
Usp54Q8BL06 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Gm14592-201ENSMUST00000117201 560 ntBASIC16.19■□□□□ 0.18
Usp54Q8BL06 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Gm44498-201ENSMUST00000199509 111 ntBASIC16.19■□□□□ 0.18
Usp54Q8BL06 Gm35960-201ENSMUST00000202712 767 ntBASIC16.19■□□□□ 0.18
Usp54Q8BL06 Gm18001-201ENSMUST00000212023 688 ntBASIC16.19■□□□□ 0.18
Usp54Q8BL06 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC16.19■□□□□ 0.18
Usp54Q8BL06 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp54Q8BL06 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Mir181d-201ENSMUST00000102383 72 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 Mir1893-201ENSMUST00000122565 83 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm9625-201ENSMUST00000180422 955 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm43275-201ENSMUST00000202053 1020 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm38192-201ENSMUST00000194364 1847 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm44755-201ENSMUST00000207830 2102 ntBASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp54Q8BL06 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm5909-201ENSMUST00000119768 1281 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm14052-201ENSMUST00000121434 1031 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Mir6387-201ENSMUST00000184042 108 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm45258-201ENSMUST00000210042 853 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm42498-201ENSMUST00000199981 1372 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm15707-201ENSMUST00000118804 996 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm8019-201ENSMUST00000119317 587 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm20493-201ENSMUST00000173706 213 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Mir8091-201ENSMUST00000183602 139 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp54Q8BL06 Gm8234-201ENSMUST00000198523 1107 ntBASIC16.17■□□□□ 0.18
Usp54Q8BL06 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms