Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Samm50Q8BGH2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm12380-201ENSMUST00000119012 544 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm12266-201ENSMUST00000120311 962 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm15610-201ENSMUST00000120584 195 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm26461-201ENSMUST00000175064 290 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm18827-201ENSMUST00000188341 790 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Samm50Q8BGH2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Samm50Q8BGH2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Samm50Q8BGH2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Samm50Q8BGH2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Samm50Q8BGH2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.58□□□□□ -0.23
Samm50Q8BGH2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm12164-201ENSMUST00000121695 551 ntBASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm17040-202ENSMUST00000170597 889 ntBASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Mir5132-201ENSMUST00000175166 71 ntBASIC13.58□□□□□ -0.24
Samm50Q8BGH2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.58□□□□□ -0.24
Samm50Q8BGH2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Samm50Q8BGH2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Samm50Q8BGH2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms