Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm11989-201ENSMUST00000117240 672 ntBASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm11362-201ENSMUST00000118838 850 ntBASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.31□□□□□ -0.44
Trim6Q8BGE7 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim6Q8BGE7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Snora78-201ENSMUST00000158630 128 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm9230-201ENSMUST00000188228 532 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm42660-201ENSMUST00000197733 947 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Morn2-202ENSMUST00000227729 656 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim6Q8BGE7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim6Q8BGE7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms