Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm13035-201ENSMUST00000117496 342 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm11783-201ENSMUST00000119549 885 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm8199-201ENSMUST00000121323 823 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm23085-201ENSMUST00000157849 293 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm16570-201ENSMUST00000161951 436 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm5733-201ENSMUST00000190232 939 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm43002-201ENSMUST00000200310 155 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Trim50Q810I2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.29□□□□□ -0.6
Trim50Q810I2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim50Q810I2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm4909-201ENSMUST00000118749 794 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm13461-201ENSMUST00000120980 662 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm11450-201ENSMUST00000121144 333 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm25732-201ENSMUST00000175168 60 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Mir6927-201ENSMUST00000184494 71 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm5369-201ENSMUST00000217499 588 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm18065-201ENSMUST00000221395 526 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.28□□□□□ -0.6
Trim50Q810I2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms