Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp6nlQ80XC3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm15329-201ENSMUST00000121408 155 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm22379-201ENSMUST00000157480 131 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm4862-201ENSMUST00000170405 438 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm20392-201ENSMUST00000173047 701 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm26989-201ENSMUST00000182608 749 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm7082-201ENSMUST00000209880 969 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp6nlQ80XC3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm25053-201ENSMUST00000103982 133 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm25922-201ENSMUST00000104281 130 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm24679-201ENSMUST00000158762 111 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm25053-202ENSMUST00000199731 132 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.8□□□□□ -0.36
Usp6nlQ80XC3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp6nlQ80XC3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp6nlQ80XC3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms