Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm12516-201ENSMUST00000120819 385 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm7741-201ENSMUST00000181445 989 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm44551-201ENSMUST00000208804 171 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh19Q80TF3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Matn2-203ENSMUST00000226766 3252 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms