Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm21092-201ENSMUST00000178995 955 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm37028-201ENSMUST00000194276 107 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm38117-201ENSMUST00000194653 939 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm44329-201ENSMUST00000197469 112 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.84□□□□□ -0.67
Pif1Q80SX8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pif1Q80SX8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm22442-201ENSMUST00000157256 144 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm17877-201ENSMUST00000192578 814 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm43852-201ENSMUST00000202098 917 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm45509-201ENSMUST00000209624 1229 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.83□□□□□ -0.68
Pif1Q80SX8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pif1Q80SX8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pif1Q80SX8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms