Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm11500-201ENSMUST00000118237 601 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm6905-201ENSMUST00000205729 511 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm23251-201ENSMUST00000103773 110 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm13611-201ENSMUST00000118269 318 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm15207-201ENSMUST00000119259 442 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm8199-201ENSMUST00000121323 823 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm9555-201ENSMUST00000200908 583 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm6867-201ENSMUST00000219165 425 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc2Q6PDG5 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Gm12165-201ENSMUST00000117047 342 ntBASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.49□□□□□ -0.25
Smarcc2Q6PDG5 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms