Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm15198-201ENSMUST00000117283 177 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm27501-201ENSMUST00000183599 107 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm6621-201ENSMUST00000193251 772 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Lect2-202ENSMUST00000225183 823 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm11660-201ENSMUST00000120955 412 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm21769-201ENSMUST00000211922 111 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm9368-201ENSMUST00000219348 831 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smarcd3Q6P9Z1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms