Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a2Q64739 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a2Q64739 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a2Q64739 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a2Q64739 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a2Q64739 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm13624-201ENSMUST00000120263 462 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC13.73□□□□□ -0.21
Col11a2Q64739 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.73□□□□□ -0.21
Col11a2Q64739 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm11540-201ENSMUST00000117457 780 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm4943-201ENSMUST00000132879 424 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm4705-201ENSMUST00000177415 354 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Col11a2Q64739 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Gm10020-201ENSMUST00000081993 612 ntBASIC13.73□□□□□ -0.21
Col11a2Q64739 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a2Q64739 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col11a2Q64739 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a2Q64739 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col11a2Q64739 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm14176-201ENSMUST00000121302 477 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm22388-201ENSMUST00000158194 248 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm23582-201ENSMUST00000158530 139 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm10254-201ENSMUST00000052888 867 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm5278-201ENSMUST00000055957 552 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Gm10581-201ENSMUST00000097986 231 ntBASIC13.72□□□□□ -0.21
Col11a2Q64739 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col11a2Q64739 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms